Report for Sequence Feature Glyma18g07140
Feature Type: gene_model
Chromosome: Gm18
Start: 5825919
stop: 5829829
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma18g07140
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G58940 AT
Annotation by Michelle Graham. TAIR10: calmodulin-binding receptor-like cytoplasmic kinase 1 | chr5:23798659-23800716 FORWARD LENGTH=470
SoyBase E_val: 2.33E-156 ISS
GO:0009409 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cold
SoyBase N/A ISS
GO:0009627 GO-bp
Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance
SoyBase N/A ISS
GO:0009651 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to salt stress
SoyBase N/A ISS
GO:0009697 GO-bp
Annotation by Michelle Graham. GO Biological Process: salicylic acid biosynthetic process
SoyBase N/A ISS
GO:0009737 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus
SoyBase N/A ISS
GO:0042542 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0004683 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calmodulin-dependent protein kinase activity
SoyBase N/A ISS
GO:0005516 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calmodulin binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF813 Panther
JGI ISS
PF07714 PFAM
Protein tyrosine kinase
JGI ISS
UniRef100_D8V833 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Calcium-dependent/calmodulin-binding receptor-like kinase n=1 Tax=Glycine soja RepID=D8V833_GLYSO
SoyBase E_val: 0 ISS
UniRef100_D8V833 UniRef
Annotation by Michelle Graham. Best UniRef hit: Calcium-dependent/calmodulin-binding receptor-like kinase n=1 Tax=Glycine soja RepID=D8V833_GLYSO
SoyBase E_val: 0 ISS
Expression Patterns of Glyma18g07140
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma18g07140 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.18g064100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma18g07140
Coding sequences of Glyma18g07140
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma18g07140.1 sequence type=CDS gene model=Glyma18g07140 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGAAAACACCAGCCCCCAGTTTGCATCAGTCTAACCAAAGACAAAAGAATGTTGGATTCCAAGATAGAGGTGCAGCCAATGGCACACAGAGTCACAGTGTTCAGAACCATTCTGCTCTGACATATTTCAAGTCTTCCTTCAAGAAATTTTTTACATTGTTTCTCTCTGGGAAGAGAAAAACAGATTCAGAAGCTGCTGAAAGTGATGACCGAAAGAATACACACAAAGTTAGAGGGGTATCATCTTCCACAGATGTATCATCTGATAGTTCCAAGAGTTCATCAAAAAGGGTGTCTTCTCATTCCTCTGCATCATCTGGCCCTACAAGAAGTAGTCAGCTTGGAATGGGAAATTTCACCTTTGAGGAAATCTACAAGGCAACGGCAAAGTTCTCTCTTGATAATAAGATTGGGGAAGGTGCGTTTGGAACAGTGTATAAGGGAAAGCTTAATGATGGATCCCTTGTGGCTGTAAAGCGTGCCAAGAAGGATTTACCAAACAATAACTTAGCTGAGTTCAAGAATGAAATAAACACCTTGTCAAAAATTGAGCACATTAACCTTGTAAAGTGGTATGGATATTTGGAGCATGGACATGAAAAAATTATTGTTGTTGAATATGTTAGTAATGGAACTCTTCGGGAACATTTAGATGGTATTCGGGGAGATGTACTAGAAATTGGTGAGCGTCTAGACATAGCAATTGATATAGCTCATGCAATTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAATATCTTAATCACTGATAAACTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCTCGGTTGGGACCAGAAGACCCAGGTGCAACCCATATTTCAACTCAAATTAAAGGAACTGCTGGCTACATGGATCCTGATTACATGCGAACTCAACATCTCTCTGAAAAGAGCGATGTTTATTCCTTCGGCGTGTTGCTTGTTGAAATGATGACAGGAAGACATCCAATTGAACCACAGAGACCTCTCAGTGAGAGAGTTACAATTAAATGGGCAATGCAGTTGTTGAAACAAGCAGAAGTTGTGATGGCCATGGATCCGAGACTGAGGAGAAATCCAGCCTCAAACAAGGCAGTACAAAAGGTTCTCAAGCTAGCTTTCCAATGCCTTGCACCAGGGAGACAACCACGACCATCTATGAAGAGTTGTGCAGAGGTTCTGTGGGAGATCCGTAAAGATTTTAGAGAAAAAGCATTTTCTCATCCTCCTCACCATTCTGCAGATTTTCCTCAAAGAGATGGTAGGAAGAATAGGCATAAGACATATGGTATTGAAGATGGTAAAGGCTATAAATTTGTATCTGCTTAA
Predicted protein sequences of Glyma18g07140
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma18g07140.1 sequence type=predicted peptide gene model=Glyma18g07140 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKKTPAPSLHQSNQRQKNVGFQDRGAANGTQSHSVQNHSALTYFKSSFKKFFTLFLSGKRKTDSEAAESDDRKNTHKVRGVSSSTDVSSDSSKSSSKRVSSHSSASSGPTRSSQLGMGNFTFEEIYKATAKFSLDNKIGEGAFGTVYKGKLNDGSLVAVKRAKKDLPNNNLAEFKNEINTLSKIEHINLVKWYGYLEHGHEKIIVVEYVSNGTLREHLDGIRGDVLEIGERLDIAIDIAHAITYLHMYTDHPIIHRDIKASNILITDKLRAKVADFGFARLGPEDPGATHISTQIKGTAGYMDPDYMRTQHLSEKSDVYSFGVLLVEMMTGRHPIEPQRPLSERVTIKWAMQLLKQAEVVMAMDPRLRRNPASNKAVQKVLKLAFQCLAPGRQPRPSMKSCAEVLWEIRKDFREKAFSHPPHHSADFPQRDGRKNRHKTYGIEDGKGYKFVSA*